Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGGCCGCGGGCTGCT
..(((((((((((((......&))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177423
GeneSymbolPPFIA1
Binding site124,139
Score0.846
Seed1
Au0.206
Energy-21.9
Binding len15
Me-5.19
Phylopstem0.32134242142857145
Phylopflank0.007519207499999986
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end2
Position5UTR
2D Structure