Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGGAATAGGTGTAGCTGCC
..(((((((((.((((...((&))...)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177424
GeneSymbolSTX12
Binding site2477,2497
Score0.846
Seed1
Au0.515
Energy-18.4
Binding len20
Me-8.304
Phylopstem3.086096433333333
Phylopflank3.7372338725
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure