Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGCCTGAGAGTGCAGCTGCC
..(((((((((.((...((((&.))))..)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177433
GeneSymbolMAGED2
Binding site542,567
Score0.923
Seed1
Au0.397
Energy-24.6
Binding len20
Me-9.272
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure