Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTTCAGCAACTGCAGGCTGA
...((((((((((((((((((&)).)))..)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177437
GeneSymbolTAS2R60
Binding site887,910
Score0.846
Seed0
Au0.471
Energy-20.5
Binding len23
Me-6.515
Phylopstem0.5626490654090909
Phylopflank-0.2599920257429488
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure