Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAACCCCTCAGCATGGCAGGCCTGCAGC
(((((((((((((((((((((&)))))))))))..........))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177438
GeneSymbolDICER1
Binding site357,391
Score0.846
Seed1
Au0.382
Energy-23.7
Binding len34
Me-3.938
Phylopstem2.406902260606061
Phylopflank2.8718010974999997
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end8
PositionCDS
2D Structure