Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAGGGGTACCCGGTGG
((((((..(((((((((((...&)))))))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177439
GeneSymbolFTSJ1
Binding site258,279
Score0.846
Seed0
Au0.353
Energy-24.8
Binding len21
Me-7.795
Phylopstem0.7407327636363635
Phylopflank1.5614374324999996
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end5
Position5UTR
2D Structure