Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGATGTGACGCTCCTCTACAGCCAGCTGCAGG
((((((((..((((((((((.&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177439
GeneSymbolFTSJ1
Binding site869,905
Score0.846
Seed1
Au0.382
Energy-23.9
Binding len21
Me-6.236
Phylopstem-1.5864323636363635
Phylopflank-0.3674448112499999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure