Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAGCCGCGGCGCC
..((.(((((((((.(.....&).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177452
GeneSymbolTRAPPC6B
Binding site139,153
Score0.846
Seed0
Au0.294
Energy-18.7
Binding len14
Me-9.811
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure