Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGAGATGTCCCAAAGGCCCTCAGGGCCAAGCCGGGCCAGG
..(((((.((((((((((((((&))))))))))))...........................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177455
GeneSymbolBHLHA15
Binding site1867,1914
Score0.846
Seed0
Au0.338
Energy-27.3
Binding len47
Me-7.271
Phylopstem2.634826336585366
Phylopflank2.25635328375
Longest consecutive pairings12
Position of longest consecutive pairings35
Pairings in 3prime end8
Position3UTR
2D Structure