Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCACATGTGGCTGGCTGTGAGCTGTG
..((((((((((((((((((.&)))))))..........))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349772
GeneSymbolRUBCNL
Binding site2001,2031
Score0.846
Seed1
Au0.544
Energy-20.7
Binding len30
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure