Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGCAATGGGAGCCAT
...((((((((..((((((...&))))))....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177457
GeneSymbolLYNX1
Binding site3175,3194
Score1.0
Seed0
Au0.426
Energy-24.4
Binding len19
Me-11.15
Phylopstem0.284661625
Phylopflank0.037967825
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure