Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGCAATGGGAGCCAT
...((((((((..((((((...&))))))....)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177477
GeneSymbolLYNX1
Binding site3158,3177
Score0.923
Seed0
Au0.426
Energy-24.4
Binding len19
Me-11.15
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure