Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCCAGCCGCGGGGGGTGCACGGAGAAAAGGGGCGGGGTGG
((((.((((((((((((((((.&))))))))....................))))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177537
GeneSymbolMAGED4B
Binding site11,54
Score0.923
Seed0
Au0.265
Energy-27.2
Binding len43
Me-8.057
Phylopstem0.7087203527777778
Phylopflank1.8307315625
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end7
Position5UTR
2D Structure