Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCATGCAACTGGAGTCTGTT
..((((((.(((((((((((.&)))..)))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177538
GeneSymbolCYP20A1
Binding site725,747
Score1.0
Seed1
Au0.632
Energy-20.1
Binding len22
Me-6.013
Phylopstem1.2171661692307691
Phylopflank1.8207818574999997
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure