Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTTTGTGATGATCAGCTCAGCGGCCCAGCTGCT
..(((((((.((((((..(((&.)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177540
GeneSymbolTAS1R1
Binding site1343,1380
Score1.0
Seed1
Au0.456
Energy-24.0
Binding len20
Me-6.2
Phylopstem3.903655
Phylopflank3.3363156875000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure