Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAAGAGTGAGATGACCCCAGAGGAGCTGCAGA
..((((((((..((((((....&.)))))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177542
GeneSymbolSNRPD2
Binding site236,271
Score0.846
Seed1
Au0.456
Energy-20.5
Binding len18
Me-11.129
Phylopstem5.5874909
Phylopflank5.311273462499999
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure