Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAAGGGACTGAGCTAAACAGTGT
((((((((((((((((((....&)))))))))))....))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177551
GeneSymbolHCAR2
Binding site1773,1800
Score0.846
Seed1
Au0.529
Energy-23.8
Binding len27
Me-3.938
Phylopstem4.886411318076924
Phylopflank3.283162961374999
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end4
Position3UTR
2D Structure