Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATAACCGCAGCA
.....(((((((((((.....&))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177551
GeneSymbolHCAR2
Binding site1041,1053
Score0.846
Seed0
Au0.426
Energy-19.8
Binding len12
Me-13.666
Phylopstem0.3760784727272728
Phylopflank0.004310607499999989
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure