Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGAGGCAGTGGAGATGGAAGTCCAAGCTGCAGCTGTGGCTGTG
..(((((((((((((((....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177557
GeneSymbolTRO
Binding site808,855
Score1.0
Seed1
Au0.426
Energy-23.3
Binding len17
Me-4.957
Phylopstem0.2654056533333333
Phylopflank0.5351707174999999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure