Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCAGCAGCTGGGGCTGG
...(((((.(((((((..(((&)))...))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177559
GeneSymbolCSNK2A1
Binding site7028,7048
Score0.846
Seed0
Au0.471
Energy-20.8
Binding len20
Me-7.571
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure