Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCATTGCTTAGATGGCAGGA
.((((.(((.((((((((((..&)))))))))).....))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_177560
GeneSymbolCSNK2A1
Binding site3765,3789
Score0.846
Seed0
Au0.544
Energy-20.1
Binding len24
Me-6.937
Phylopstem0.20034255
Phylopflank-0.10667516637499995
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure