Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGTTGGAGGCTGCAGTGA
(((((((((((((((((((...&)))))))))..)))).)..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177560
GeneSymbolCSNK2A1
Binding site11002,11027
Score1.0
Seed1
Au0.456
Energy-23.7
Binding len25
Me-3.938
Phylopstem1.1628547916666665
Phylopflank0.9334455374999999
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure