Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAATCCCGGCTGCT
..(((((((.(((((..((((&))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177560
GeneSymbolCSNK2A1
Binding site1515,1533
Score1.0
Seed1
Au0.529
Energy-21.1
Binding len18
Me-6.433
Phylopstem0.48417677142857146
Phylopflank0.04140100374999999
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure