Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGCGGGAGCCAA
...((((((((..(((((....&))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177925
GeneSymbolH2AJ
Binding site587,602
Score0.846
Seed0
Au0.351
Energy-22.8
Binding len15
Me-11.15
Phylopstem-0.08136603750000002
Phylopflank0.55257992375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure