Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGATGTCATGGAGGGCCGGTGACATCTAGCGGGGAGGTGGGCGGCGAGGGTCC
.((((((((.((((.((..((&.))..)).)))).)).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_177925
GeneSymbolH2AJ
Binding site536,589
Score0.846
Seed1
Au0.368
Energy-26.8
Binding len23
Me-5.771
Phylopstem0.8267825555555555
Phylopflank0.39060275624999996
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure