Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGGCCGACCAGGGACCTGCCCGCCTGCGGCTGCT
..(((((((((((.(..((((&.))))..).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177951
GeneSymbolPPM1A
Binding site415,453
Score0.974
Seed1
Au0.397
Energy-24.3
Binding len22
Me-6.047
Phylopstem0.2751785833333334
Phylopflank1.4164137402500003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure