Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAGCCTGGGAGACCCCGACTTTCTCTAACCCAGTGGCTGTG
..(((((((((((((((((((&)))))))))))...........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177963
GeneSymbolSYT12
Binding site3464,3511
Score1.0
Seed1
Au0.324
Energy-22.2
Binding len47
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings36
Pairings in 3prime end8
Position3UTR
2D Structure