Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCGTTGTATAGCCT
....((((((((((((((((..&))))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_177965
GeneSymbolCFAP418
Binding site397,415
Score0.846
Seed0
Au0.559
Energy-21.2
Binding len18
Me-9.547
Phylopstem4.212003529411764
Phylopflank3.7412662187499994
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure