Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACGGAAAGCAGTTGCAC
.(((((((((..(((((((..&)))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177966
GeneSymbolPDE12
Binding site8475,8495
Score0.923
Seed1
Au0.559
Energy-21.9
Binding len20
Me-9.965
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure