Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTAGTCCCAGCTGCT
..(((((((.((.....((((&)))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177966
GeneSymbolPDE12
Binding site5688,5707
Score0.846
Seed1
Au0.412
Energy-20.9
Binding len19
Me-9.314
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure