Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCGAGGGAGCGCAGCTGTG
..(((((((((.((.(..(.(&).)..).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177967
GeneSymbolUBAC2
Binding site648,668
Score0.923
Seed1
Au0.412
Energy-19.9
Binding len20
Me-9.039
Phylopstem4.343263444444444
Phylopflank3.0182683712500014
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure