Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGTTATGGCCTGAGCAGCATGCAAG
((((((((((((((((((.((&)).))))))))...))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177968
GeneSymbolPPM1B
Binding site479,505
Score0.949
Seed1
Au0.5
Energy-23.5
Binding len26
Me-3.938
Phylopstem-0.32231531818181813
Phylopflank0.06853610750000005
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure