Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCCCAGCTGCGGC
(((((((((.((..((((((.&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177972
GeneSymbolTUB
Binding site5400,5418
Score1.0
Seed1
Au0.456
Energy-23.4
Binding len18
Me-7.326
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure