Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACAGCTCTGGAGCTGGAAG
((.(((((.(((((((((((.&))))))))))..).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177976
GeneSymbolARL6
Binding site3812,3835
Score1.0
Seed0
Au0.559
Energy-21.7
Binding len23
Me-6.552
Phylopstem0.31269739999999996
Phylopflank0.019320997000000006
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure