Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAGAGGGGACACATCCAGCCTAAGGTATGATTTTCGCTACAGTGA
((((((((((((((((((((..&)))))))))))))..........................))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177977
GeneSymbolHAP1
Binding site1387,1436
Score0.846
Seed1
Au0.456
Energy-25.6
Binding len49
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings36
Pairings in 3prime end6
PositionCDS
2D Structure