Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGTGGTGTGTCTCCTCTCCCTCCCTCCCTCTTCTGCCAGTGG
(((((((.((...(((((((((&))))))))).)).............................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177977
GeneSymbolHAP1
Binding site3633,3682
Score0.923
Seed1
Au0.324
Energy-25.0
Binding len49
Me-13.712
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings40
Pairings in 3prime end8
Position3UTR
2D Structure