Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAACACTGCAGCTCGCAT
.(((((((((((.(((.((((&))))..))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177977
GeneSymbolHAP1
Binding site616,638
Score1.0
Seed1
Au0.412
Energy-23.8
Binding len22
Me-5.082
Phylopstem2.0989380291666664
Phylopflank2.0410665443750005
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure