Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCCAGCCGCCTCTGCT
..((((..(((((((.((((.&))))..)))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177983
GeneSymbolPPM1G
Binding site1993,2013
Score0.872
Seed0
Au0.324
Energy-21.7
Binding len20
Me-9.047
Phylopstem1.296619185714286
Phylopflank1.190332101
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure