Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCAAATCGCTGAGCTGCT
..(((((((((((((..((((&))))..))).))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177985
GeneSymbolARL5A
Binding site1156,1179
Score0.846
Seed1
Au0.662
Energy-20.5
Binding len23
Me-5.19
Phylopstem3.1473681875
Phylopflank3.8932506512500002
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure