Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACCTGAAAGCTGCAAA
((((((((.(((..(((((((&))))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177985
GeneSymbolARL5A
Binding site573,594
Score0.846
Seed1
Au0.735
Energy-19.9
Binding len21
Me-7.14
Phylopstem6.902474874999999
Phylopflank5.245587489999999
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
Position3UTR
2D Structure