Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTTCCTTTGCAAAACTGCAGTTTTGACAGCAT
.(((((((((((((((((((.&.)))))))..)))))))))......))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177989
GeneSymbolACTL6A
Binding site464,501
Score0.885
Seed1
Au0.559
Energy-19.6
Binding len29
Me-3.793
Phylopstem2.6843079851851854
Phylopflank1.8116684462500001
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure