Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACTCTGTATGCTAGC
..((((((((((..((......&))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_177990
GeneSymbolPAK5
Binding site3689,3704
Score1.0
Seed1
Au0.676
Energy-15.4
Binding len15
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure