Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCTGCCACGAAAACCCGGAGCAGCTGCGT
.(((((((((((((....(((&.))).....))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177990
GeneSymbolPAK5
Binding site24,57
Score1.0
Seed1
Au0.309
Energy-21.6
Binding len27
Me-4.762
Phylopstem0.8459913058823529
Phylopflank1.0244088153260869
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure