Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGATCTTGGTTGGCCAC
...(((((((..(((((((((.&)))))))))....))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177995
GeneSymbolPTPDC1
Binding site1564,1587
Score0.904
Seed0
Au0.426
Energy-24.2
Binding len23
Me-12.686
Phylopstem3.1916855555555554
Phylopflank4.2290176637500005
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure