Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGAGCGGCCGGGTTGCGAC
((((((((.(((((((..(((&)))...))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349838
GeneSymbolCEP78
Binding site187,209
Score0.846
Seed1
Au0.235
Energy-22.7
Binding len22
Me-4.994
Phylopstem0.21715333750000002
Phylopflank-0.25773067125
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure