Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCCAGCCTTGGCTGTCAAA
(((((((((.(((((((((((&))))))).)))).)))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177995
GeneSymbolPTPDC1
Binding site3275,3299
Score0.846
Seed1
Au0.5
Energy-23.4
Binding len24
Me-5.18
Phylopstem2.744450033333333
Phylopflank4.281623500000001
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure