Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAACCCCACTGCAGTGGCAGC
((((.((((((((.((.((((&)))).))...)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177995
GeneSymbolPTPDC1
Binding site1358,1382
Score0.923
Seed0
Au0.5
Energy-21.3
Binding len24
Me-8.913
Phylopstem0.8681613875
Phylopflank0.9214883537500004
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure