Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGGGGAGGGAGCCC
....(((((((((((.(((...&))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177998
GeneSymbolOTOP1
Binding site1623,1639
Score1.0
Seed0
Au0.353
Energy-24.3
Binding len16
Me-9.78
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure