Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTAGGAGTGAGCTAACAAGAGTTCATTGGAGCCAACTAGGAGTGG
(((((((((((((((((((...&)))))))))....................))))))).......))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_177998
GeneSymbolOTOP1
Binding site1920,1967
Score0.846
Seed1
Au0.491
Energy-21.1
Binding len47
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings38
Pairings in 3prime end5
Position3UTR
2D Structure