Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTGTGCTTCCTGACGGCGCTCATGCTGCTGCAGCTGCT
..(((((((((((.(((.(((&.)))..))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_177998
GeneSymbolOTOP1
Binding site336,379
Score1.0
Seed1
Au0.353
Energy-24.8
Binding len22
Me-5.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure